Fwd: PNAS Early Edition for 24 Dec 2014

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Proceedings of the National Academy of Sciences Early Edition articles for 24 December 2014 Letters (Online Only) Mice are not men H. Shaw Warren, Ronald G. Tompkins, Lyle L. Moldawer, Junhee Seok, Weihong Xu, Michael N. Mindrinos, Ronald V. Maier, Wenzhong Xiao, and Ronald W. Davis Genomic responses to inflammation in mouse models mimic humans: We concur, apples to oranges comparisons won't do Tal Shay, James A. Lederer, and Christophe Benoist Reply to Warren et al. and Shay et al.: Commonalities across species do exist and are potentially important Keizo Takao, Hideo Hagihara, and Tsuyoshi Miyakawa Motor vs. cognitive elements of apparent "hyperlocomotion": A conceptual and experimental clarification Eleni Konsolaki and Irini Skaliora Reply to Konsolaki and Skaliora: Habituation, hyperlocomotion, and "genuine hyperlocomotion" Stéfano Pupe, Nadine Schweizer, and Åsa Wallén-Mackenzie Incorrect representation of Barrier Canyon rock art site's history and other factors invalidate reported dates Nancy Simon and Richard Reed Reply to Simon and Reed: Independent and converging results rule out historic disturbance and confirm age constraints for Barrier Canyon rock art Joel L. Pederson, Melissa S. Chapot, Steven R. Simms, Reza Sohbati, Tammy M. Rittenour, Andrew S. Murray, and Gary Cox Questionable evidence of natural warming of the northwestern United States John T. Abatzoglou, David E. Rupp, and Philip W. Mote Reply to Abatzoglou et al.: Atmospheric controls on northwest United States air temperatures, 1948–2012 James A. Johnstone and Nathan J. Mantua Commentaries What are the roles of V-ATPases in membrane fusion? Alexey J. Merz How many scientific papers are not original? Michael Lesk New evidence on the origin of carnivorous plants Thomas J. Givnish The curious case of the Arctic mastodons Duane Froese Downsides of social capital Alejandro Portes Subtle genetic modifications transformed an enteropathogen into a flea-borne pathogen Elisabeth Carniel Epigenetic Changes in the Developing Brain: Effects on Behavior Sackler Colloquium (free online) Biological Sciences — Biochemistry ATRX tolerates activity-dependent histone H3 methyl/phos switching to maintain repetitive element silencing in neurons Kyung-Min Noh, Ian Maze, Dan Zhao, Bin Xiang, Wendy Wenderski, Peter W. Lewis, Li Shen, Haitao Li, and C. David Allis Physical Sciences Applied Mathematics Only three driver gene mutations are required for the development of lung and colorectal cancers Cristian Tomasetti, Luigi Marchionni, Martin A. Nowak, Giovanni Parmigiani, and Bert Vogelstein Applied Physical Sciences Wrinkling crystallography on spherical surfaces Miha Brojan, Denis Terwagne, Romain Lagrange, and Pedro M. Reis Free-energy landscape of ion-channel voltage-sensor–domain activation  Lucie Delemotte, Marina A. Kasimova, Michael L. Klein, Mounir Tarek, and Vincenzo Carnevale Chemistry Energetic basis for the molecular-scale organization of bone Jinhui Tao, Keith C. Battle, Haihua Pan, E. Alan Salter, Yung-Ching Chien, Andrzej Wierzbicki, and James J. De Yoreo In vivo albumin labeling and lymphatic imaging Yu Wang, Lixin Lang, Peng Huang, Zhe Wang, Orit Jacobson, Dale O. Kiesewetter, Iqbal U. Ali, Gaojun Teng, Gang Niu, and Xiaoyuan Chen Earth, Atmospheric, and Planetary Sciences Iron stable isotopes track pelagic iron cycling during a subtropical phytoplankton bloom Michael J. Ellwood, David A. Hutchins, Maeve C. Lohan, Angela Milne, Philipp Nasemann, Scott D. Nodder, Sylvia G. Sander, Robert Strzepek, Steven W. Wilhelm, and Philip W. Boyd Magnesium stable isotope ecology using mammal tooth enamel Jeremy E. Martin, Derek Vance, and Vincent Balter Effects of anthropogenic emissions on aerosol formation from isoprene and monoterpenes in the southeastern United States Lu Xu, Hongyu Guo, Christopher M. Boyd, Mitchel Klein, Aikaterini Bougiatioti, Kate M. Cerully, James R. Hite, Gabriel Isaacman-VanWertz, Nathan M. Kreisberg, Christoph Knote, Kevin Olson, Abigail Koss, Allen H. Goldstein, Susanne V. Hering, Joost de Gouw, Karsten Baumann, Shan-Hu Lee, Athanasios Nenes, Rodney J. Weber, and Nga Lee Ng Carbonate formation events in ALH 84001 trace the evolution of the Martian atmosphere Robina Shaheen, Paul B. Niles, Kenneth Chong, Catherine M. Corrigan, and Mark H. Thiemens Engineering Transdermal deferoxamine prevents pressure-induced diabetic ulcers Dominik Duscher, Evgenios Neofytou, Victor W. Wong, Zeshaan N. Maan, Robert C. Rennert, Mohammed Inayathullah, Michael Januszyk, Melanie Rodrigues, Andrey V. Malkovskiy, Arnetha J. Whitmore, Graham G. Walmsley, Michael G. Galvez, Alexander J. Whittam, Michael Brownlee, Jayakumar Rajadas, and Geoffrey C. Gurtner Controlling cell–cell interactions using surface acoustic waves Feng Guo, Peng Li, Jarrod B. French, Zhangming Mao, Hong Zhao, Sixing Li, Nitesh Nama, James R. Fick, Stephen J. Benkovic, and Tony Jun Huang Human 3D vascularized organotypic microfluidic assays to study breast cancer cell extravasation Jessie S. Jeon, Simone Bersini, Mara Gilardi, Gabriele Dubini, Joseph L. Charest, Matteo Moretti, and Roger D. Kamm Physics Precisely cyclic sand: Self-organization of periodically sheared frictional grains John R. Royer and Paul M. Chaikin High-pressure superconducting phase diagram of 6Li: Isotope effects in dense lithium Anne Marie Schaeffer, Scott R. Temple, Jasmine K. Bishop, and Shanti Deemyad Multifarious assembly mixtures: Systems allowing retrieval of diverse stored structures Arvind Murugan, Zorana Zeravcic, Michael P. Brenner, and Stanislas Leibler Evolutionary meandering of intermolecular interactions along the drift barrier Michael Lynch and Kyle Hagner Social Sciences Economic Sciences Sound credit scores and financial decisions despite cognitive aging  Ye Li, Jie Gao, A. Zeynep Enkavi, Lisa Zaval, Elke U. Weber, and Eric J. Johnson Psychological and Cognitive Sciences Fear and C-reactive protein cosynergize annual pulse increases in healthy adults  Shani Shenhar-Tsarfaty, Nadav Yayon, Nir Waiskopf, Itzhak Shapira, Sharon Toker, David Zaltser, Shlomo Berliner, Ya'acov Ritov, and Hermona Soreq Social Sciences Effects of income supplementation on health of the poor elderly: The case of Mexico Emma Aguila, Arie Kapteyn, and James P. Smith Measuring the effectiveness of scientific gatekeeping Kyle Siler, Kirby Lee, and Lisa Bero Biological Sciences Agricultural Sciences Rare allele of a previously unidentified histone H4 acetyltransferase enhances grain weight, yield, and plant biomass in rice  Xian Jun Song, Takeshi Kuroha, Madoka Ayano, Tomoyuki Furuta, Keisuke Nagai, Norio Komeda, Shuhei Segami, Kotaro Miura, Daisuke Ogawa, Takumi Kamura, Takamasa Suzuki, Tetsuya Higashiyama, Masanori Yamasaki, Hitoshi Mori, Yoshiaki Inukai, Jianzhong Wu, Hidemi Kitano, Hitoshi Sakakibara, Steven E. Jacobsen, and Motoyuki Ashikari Anthropology Evolutionary pattern in the OXT-OXTR system in primates: Coevolution and positive selection footprints Pedro Vargas-Pinilla, Vanessa Rodrigues Paixão-Côrtes, Pamela Paré, Luciana Tovo-Rodrigues, Carlos Meton de Alencar Gadelha Vieira, Agatha Xavier, David Comas, Alcides Pissinatti, Marialva Sinigaglia, Maurício Menegatti Rigo, Gustavo Fioravanti Vieira, Aldo B. Lucion, Francisco Mauro Salzano, and Maria Cátira Bortolini Gracility of the modern Homo sapiens skeleton is the result of decreased biomechanical loading Timothy M. Ryan and Colin N. Shaw Recent origin of low trabecular bone density in modern humans Habiba Chirchir, Tracy L. Kivell, Christopher B. Ruff, Jean-Jacques Hublin, Kristian J. Carlson, Bernhard Zipfel, and Brian G. Richmond Applied Biological Sciences Controlling cell–cell interactions using surface acoustic waves Feng Guo, Peng Li, Jarrod B. French, Zhangming Mao, Hong Zhao, Sixing Li, Nitesh Nama, James R. Fick, Stephen J. Benkovic, and Tony Jun Huang Biochemistry Engineering an improved light-induced dimer (iLID) for controlling the localization and activity of signaling proteins Gurkan Guntas, Ryan A. Hallett, Seth P. Zimmerman, Tishan Williams, Hayretin Yumerefendi, James E. Bear, and Brian Kuhlman Bag6 complex contains a minimal tail-anchor–targeting module and a mock BAG domain Jee-Young Mock, Justin William Chartron, Ma'ayan Zaslaver, Yue Xu, Yihong Ye, and William Melvon Clemons Jr. Transdermal deferoxamine prevents pressure-induced diabetic ulcers Dominik Duscher, Evgenios Neofytou, Victor W. Wong, Zeshaan N. Maan, Robert C. Rennert, Mohammed Inayathullah, Michael Januszyk, Melanie Rodrigues, Andrey V. Malkovskiy, Arnetha J. Whitmore, Graham G. Walmsley, Michael G. Galvez, Alexander J. Whittam, Michael Brownlee, Jayakumar Rajadas, and Geoffrey C. Gurtner Biophysics and Computational Biology Superresolution microscopy reveals spatial separation of UCP4 and F0F1-ATP synthase in neuronal mitochondria  Enrico Klotzsch, Alina Smorodchenko, Lukas Löfler, Rudolf Moldzio, Elena Parkinson, Gerhard J. Schütz, and Elena E. Pohl Stochastic approach to the molecular counting problem in superresolution microscopy Geoffrey C. Rollins, Jae Yen Shin, Carlos Bustamante, and Steve Pressé Only three driver gene mutations are required for the development of lung and colorectal cancers Cristian Tomasetti, Luigi Marchionni, Martin A. Nowak, Giovanni Parmigiani, and Bert Vogelstein Helical buckling of actin inside filopodia generates traction Natascha Leijnse, Lene B. Oddershede, and Poul M. Bendix Free-energy landscape of ion-channel voltage-sensor–domain activation  Lucie Delemotte, Marina A. Kasimova, Michael L. Klein, Mounir Tarek, and Vincenzo Carnevale Cell Biology ETS transcription factor ETV2 directly converts human fibroblasts into functional endothelial cells Rimpei Morita, Mayu Suzuki, Hidenori Kasahara, Nana Shimizu, Takashi Shichita, Takashi Sekiya, Akihiro Kimura, Ken-ichiro Sasaki, Hideo Yasukawa, and Akihiko Yoshimura Activation of Rab8 guanine nucleotide exchange factor Rabin8 by ERK1/2 in response to EGF signaling Juanfei Wang, Jinqi Ren, Bin Wu, Shanshan Feng, Guoping Cai, Florin Tuluc, Johan Peränen, and Wei Guo Osteopetrosis in TAK1-deficient mice owing to defective NF-κB and NOTCH signaling Gaurav Swarnkar, Kannan Karuppaiah, Gabriel Mbalaviele, Tim (Hung-Po) Chen, and Yousef Abu-Amer Hooking She3p onto She2p for myosin-mediated cytoplasmic mRNA transport  Nimisha Singh, Günter Blobel, and Hang Shi Synthetic lethality of combined glutaminase and Hsp90 inhibition in mTORC1-driven tumor cells Jing Li, Alfredo Csibi, Sun Yang, Gregory R. Hoffman, Chenggang Li, Erik Zhang, Jane J. Yu, and John Blenis Developmental Biology Notch inhibition induces mitotically generated hair cells in mammalian cochleae via activating the Wnt pathway Wenyan Li, Jingfang Wu, Jianming Yang, Shan Sun, Renjie Chai, Zheng-Yi Chen, and Huawei Li Ecology Avian influenza H5N1 viral and bird migration networks in Asia  Huaiyu Tian, Sen Zhou, Lu Dong, Thomas P. Van Boeckel, Yujun Cui, Yarong Wu, Bernard Cazelles, Shanqian Huang, Ruifu Yang, Bryan T. Grenfell, and Bing Xu Magnesium stable isotope ecology using mammal tooth enamel Jeremy E. Martin, Derek Vance, and Vincent Balter Evolution Pan-vertebrate comparative genomics unmasks retrovirus macroevolution  Alexander Hayward, Charlie K. Cornwallis, and Patric Jern Evolutionary meandering of intermolecular interactions along the drift barrier Michael Lynch and Kyle Hagner Deep conservation of wrist and digit enhancers in fish  Andrew R. Gehrke, Igor Schneider, Elisa de la Calle-Mustienes, Juan J. Tena, Carlos Gomez-Marin, Mayuri Chandran, Tetsuya Nakamura, Ingo Braasch, John H. Postlethwait, José Luis Gómez-Skarmeta, and Neil H. Shubin Immunology and Inflammation Hematopoietic IKBKE limits the chronicity of inflammasome priming and metaflammation Meghana N. Patel, William G. Bernard, Nikolay B. Milev, William P. Cawthorn, Nichola Figg, Dan Hart, Xavier Prieur, Sam Virtue, Krisztina Hegyi, Stephanie Bonnafous, Beatrice Bailly-Maitre, Yajing Chu, Julian L. Griffin, Ziad Mallat, Robert V. Considine, Albert Tran, Philippe Gual, Osamu Takeuchi, Shizuo Akira, Antonio Vidal-Puig, Martin R. Bennett, and Jaswinder K. Sethi γδ T cells affect IL-4 production and B-cell tolerance Yafei Huang, Ryan A. Heiser, Thiago O. Detanico, Andrew Getahun, Greg A. Kirchenbaum, Tamara L. Casper, M. Kemal Aydintug, Simon R. Carding, Koichi Ikuta, Hua Huang, John C. Cambier, Lawrence J. Wysocki, Rebecca L. O'Brien, and Willi K. Born B-cell repertoire responses to varicella-zoster vaccination in human identical twins Chen Wang, Yi Liu, Mary M. Cavanagh, Sabine Le Saux, Qian Qi, Krishna M. Roskin, Timothy J. Looney, Ji-Yeun Lee, Vaishali Dixit, Cornelia L. Dekker, Gary E. Swan, Jörg J. Goronzy, and Scott D. Boyd Dipeptides catalyze rapid peptide exchange on MHC class I molecules Sunil Kumar Saini, Heiko Schuster, Venkat Raman Ramnarayan, Hans-Georg Rammensee, Stefan Stevanović, and Sebastian Springer RORγt-specific transcriptional interactomic inhibition suppresses autoimmunity associated with TH17 cells Tae-Yoon Park, Sung-Dong Park, Jen-Young Cho, Jae-Seung Moon, Na-Yeon Kim, Kyungsoo Park, Rho Hyun Seong, Sang-Won Lee, Tomohiro Morio, Alfred L. M. Bothwell, and Sang-Kyou Lee Medical Sciences Fear and C-reactive protein cosynergize annual pulse increases in healthy adults  Shani Shenhar-Tsarfaty, Nadav Yayon, Nir Waiskopf, Itzhak Shapira, Sharon Toker, David Zaltser, Shlomo Berliner, Ya'acov Ritov, and Hermona Soreq An in-tumor genetic screen reveals that the BET bromodomain protein, BRD4, is a potential therapeutic target in ovarian carcinoma Maria Giuseppina Baratta, Anna C. Schinzel, Yaara Zwang, Pratiti Bandopadhayay, Christian Bowman-Colin, Jennifer Kutt, Jennifer Curtis, Huiying Piao, Laura C. Wong, Andrew L. Kung, Rameen Beroukhim, James E. Bradner, Ronny Drapkin, William C. Hahn, Joyce F. Liu, and David M. Livingston In vivo albumin labeling and lymphatic imaging Yu Wang, Lixin Lang, Peng Huang, Zhe Wang, Orit Jacobson, Dale O. Kiesewetter, Iqbal U. Ali, Gaojun Teng, Gang Niu, and Xiaoyuan Chen TAp73 suppresses tumor angiogenesis through repression of proangiogenic cytokines and HIF-1α activity  Marina Stantic, Habib A. M. Sakil, Hanna Zirath, Trixy Fang, Gema Sanz, Alejandro Fernandez-Woodbridge, Ana Marin, Evelyn Susanto, Tak W. Mak, Marie Arsenian Henriksson, and Margareta T. Wilhelm TAp73 opposes tumor angiogenesis by promoting hypoxia-inducible factor 1α degradation  Ivano Amelio, Satoshi Inoue, Elke K. Markert, Arnold J. Levine, Richard A. Knight, Tak W. Mak, and Gerry Melino Human 3D vascularized organotypic microfluidic assays to study breast cancer cell extravasation Jessie S. Jeon, Simone Bersini, Mara Gilardi, Gabriele Dubini, Joseph L. Charest, Matteo Moretti, and Roger D. Kamm Microbiology Epstein–Barr virus nuclear antigen 3A partially coincides with EBNA3C genome-wide and is tethered to DNA through BATF complexes Stefanie C. S. Schmidt, Sizun Jiang, Hufeng Zhou, Bradford Willox, Amy M. Holthaus, Peter V. Kharchenko, Eric C. Johannsen, Elliott Kieff, and Bo Zhao Adaptor-mediated Lon proteolysis restricts Bacillus subtilis hyperflagellation Sampriti Mukherjee, Anna C. Bree, Jing Liu, Joyce E. Patrick, Peter Chien, and Daniel B. Kearns Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle  Xuesong He, Jeffrey S. McLean, Anna Edlund, Shibu Yooseph, Adam P. Hall, Su-Yang Liu, Pieter C. Dorrestein, Eduardo Esquenazi, Ryan C. Hunter, Genhong Cheng, Karen E. Nelson, Renate Lux, and Wenyuan Shi Terpene synthases are widely distributed in bacteria  Yuuki Yamada, Tomohisa Kuzuyama, Mamoru Komatsu, Kazuo Shin-ya, Satoshi Omura, David E. Cane, and Haruo Ikeda Patterns of accumulation of miRNAs encoded by herpes simplex virus during productive infection, latency, and on reactivation Te Du, Zhiyuan Han, Grace Zhou, and Bernard Roizman Autophagic flux without a block differentiates varicella-zoster virus infection from herpes simplex virus infection  Erin M. Buckingham, John E. Carpenter, Wallen Jackson, Leigh Zerboni, Ann M. Arvin, and Charles Grose Patterns of genome evolution that have accompanied host adaptation in Salmonella  Gemma C. Langridge, Maria Fookes, Thomas R. Connor, Theresa Feltwell, Nicholas Feasey, Bryony N. Parsons, Helena M. B. Seth-Smith, Lars Barquist, Anna Stedman, Tom Humphrey, Paul Wigley, Sarah E. Peters, Duncan J. Maskell, Jukka Corander, Jose A. Chabalgoity, Paul Barrow, Julian Parkhill, Gordon Dougan, and Nicholas R. Thomson Influenza viral neuraminidase primes bacterial coinfection through TGF-β–mediated expression of host cell receptors Ning Li, Aihui Ren, Xiaoshuang Wang, Xin Fan, Yong Zhao, George F. Gao, Patrick Cleary, and Beinan Wang Neuroscience Differential roles of delay-period neural activity in the monkey dorsolateral prefrontal cortex in visual–haptic crossmodal working memory Liping Wang, Xianchun Li, Steven S. Hsiao, Fred A. Lenz, Mark Bodner, Yong-Di Zhou, and Joaquín M. Fuster Synthetic lethal screening in the mammalian central nervous system identifies Gpx6 as a modulator of Huntington's disease Reut Shema, Ruth Kulicke, Glenn S. Cowley, Rachael Stein, David E. Root, and Myriam Heiman HDAC inhibition imparts beneficial transgenerational effects in Huntington's disease mice via altered DNA and histone methylation Haiqun Jia, Charles D. Morris, Roy M. Williams, Jeanne F. Loring, and Elizabeth A. Thomas Image statistics underlying natural texture selectivity of neurons in macaque V4  Gouki Okazawa, Satohiro Tajima, and Hidehiko Komatsu Natural asynchronies in audiovisual communication signals regulate neuronal multisensory interactions in voice-sensitive cortex  Catherine Perrodin, Christoph Kayser, Nikos K. Logothetis, and Christopher I. Petkov Activity-dependent inhibitory synapse remodeling through gephyrin phosphorylation Carmen E. Flores, Irina Nikonenko, Pablo Mendez, Jean-Marc Fritschy, Shiva K. Tyagarajan, and Dominique Muller No evidence for intracellular magnetite in putative vertebrate magnetoreceptors identified by magnetic screening  Nathaniel B. Edelman, Tanja Fritz, Simon Nimpf, Paul Pichler, Mattias Lauwers, Robert W. Hickman, Artemis Papadaki-Anastasopoulou, Lyubov Ushakova, Thomas Heuser, Guenter P. Resch, Martin Saunders, Jeremy A. Shaw, and David A. Keays Gas1 is a receptor for sonic hedgehog to repel enteric axons  Shiying Jin, David C. Martinelli, Xiaobin Zheng, Marc Tessier-Lavigne, and Chen-Ming Fan Pharmacology Stabilization of morphine tolerance with long-term dosing: Association with selective upregulation of mu-opioid receptor splice variant mRNAs Jin Xu, Andrew J. Faskowitz, Grace C. Rossi, Mingming Xu, Zhigang Lu, Ying-Xian Pan, and Gavril W. Pasternak Physiology A peripheral endocannabinoid mechanism contributes to glucocorticoid-mediated metabolic syndrome Nicole P. Bowles, Ilia N. Karatsoreos, Xiaosong Li, V. Kiran Vemuri, Jodi-Anne Wood, Zhiying Li, Kellie L. K. Tamashiro, Gary J. Schwartz, Alexandros M. Makriyannis, George Kunos, Cecilia J. Hillard, Bruce S. McEwen, and Matthew N. Hill Evening use of light-emitting eReaders negatively affects sleep, circadian timing, and next-morning alertness  Anne-Marie Chang, Daniel Aeschbach, Jeanne F. Duffy, and Charles A. Czeisler Plant Biology Arabidopsis ROCK1 transports UDP-GlcNAc/UDP-GalNAc and regulates ER protein quality control and cytokinin activity Michael C. E. Niemann, Isabel Bartrina, Angel Ashikov, Henriette Weber, Ondřej Novák, Lukáš Spíchal, Miroslav Strnad, Richard Strasser, Hans Bakker, Thomas Schmülling, and Tomáš Werner Arabidopsis ribosomal proteins control vacuole trafficking and developmental programs through the regulation of lipid metabolism  Ruixi Li, Ruobai Sun, Glenn R. Hicks, and Natasha V. Raikhel Corrections Correction for Jadi and Sejnowski, Cortical oscillations arise from contextual interactions that regulate sparse coding Correction for Robertson et al., Assembly and molecular order of two-dimensional peptoid nanosheets through the oil–water interface Correction for Lofgren et al., Opinion: Mathematical models: A key tool for outbreak response Correction for Yueh et al., The commonly used antimicrobial additive triclosan is a liver tumor promoter Correction for Paz et al., Combinatorial regulation of a signal-dependent activator by phosphorylation and acetylation Correction for Haig, Genomic imprinting and the evolutionary psychology of human kinship Correction for Hodes et al., Individual differences in the peripheral immune system promote resilience versus susceptibility to social stress Correction for Miao et al., Motionless phase stepping in X-ray phase contrast imaging with a compact source Correction for Moriconi et al., Targeting the minor pocket of C5aR for the rational design of an oral allosteric inhibitor for inflammatory and neuropathic pain relief Open Access From the Cover Inaugural Article Classic Cozzarelli Prize Winner Front Matter This message was sent to pascal.alter@gmail.com. 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